Changes for version 0.04 - 2023-11-26

  • Added List::MoreUtils to cpanfile and Makefile.PL
  • Added error when --include-terms does not exist in cohort(s)
  • Added t/die.t for the above condition (+others)
  • Refactored code in .t and .pm to enhance readability and maintainability
  • Spiced up die/warn messages with bold-colored text
  • Added utils/barcode to deal with QR codes (+Dockerfile and t)
  • csv2pheno-ranker now accepts .tsv (sep \t)
  • Turned on legend on share/r/mds_color.R
  • Fixed stringification of weights (read from YAML) on JSON export
  • Added flag --similarity-metric-cohort
  • Added terms <procedures, exposures> to bff-pxf-simulator

Modules

A module that performs semantic similarity in PXF/BFF data structures and beyond (JSON|YAML)

Provides

in utils/bff_pxf_simulator/Ontologies.pm
in lib/Pheno/Ranker/Align.pm
in lib/Pheno/Ranker/IO.pm
in lib/Pheno/Ranker/Stats.pm