Changes for version 0.023
- Added purging of WormBase cache to Update::WormBase and update script
- Added Monitor::*: httpd.pm, acedb.pm, blat.pm, mysqld.pm
- Added Monitor::WormBase.pm, wrapper around server monitoring for WormBase
- Overhauled gmod_update_installation-wormbase.PLS to use an external config file instead of hundreds of options.
- Moved the Update, Monitor, and Archive classes to Bio::GMOD::Admin::*
- version CGI now uses XML instead of plain text
- added some DTDs for version and defaults
- New module to interface with the GMOD StandardURLs protocol
Documentation
Modules
Unified API for Model Organism Databases
Generic factory for Bio::GMOD::Adaptor::* objects
Defaults for programmatically interacting with Wormbase
Defaults for programmatically interacting with SGD
Defaults for programmatically interacting with Wormbase
A generic adaptor for working with multiple MODs simultaneously
Create archives of Wormbase releases
archiving of WormBase releases
Monitor the status of an installed MOD
WormBase monitoring utils
Monitor acedb/sgifaceserver
Monitor a BLAT server
Monitor httpd
Monitor mysqld
Generics methods for updating a Bio::GMOD installation
Methods for updating a WormBase installation
Execute generic queries for different MODs
Defaults for programmatically interacting with Wormbase
Defaults for programmatically interacting with Wormbase
Discover and fetch Standard URLs from MODs
Find current versions of GMOD installations
Versioning code for WormBase
File and directory mirroring
Named parameter processing
Message processing for Bio::GMOD
Provides
in install_util/GuessDirectories.pm