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GO-TermFinder-0.4
River stage zero No dependents

Changes for version 0.40 - 2003-12-02

  • GO::TermFinder
  • Added in the ability to define a subpopulation of genes as the background from which the interesting genes were drawn. See pod for constuctor of GO::TermFinder for more details.

Modules

GO::AnnotatedGene
GO::Annotation
GO::AnnotationProvider
abstract base class defining interface for how Annotation information should be provided
GO::AnnotationProvider::AnnotationParser
parses a gene annotation file
GO::Node
provides information about a node in the Gene Ontology
GO::OntologyProvider
abstract base class providing API for the provision on Gene Ontology information
GO::OntologyProvider::OntologyParser
Provides API for retrieving data from Gene Ontology files
GO::Reference
GO::TermFinder
identify GO nodes that annotate a group of genes with a significant p-value

Examples

Other files