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Bio-DB-Das-Chado-0.31
River stage zero No dependents

Changes for version 0.31 - 2011-04-05

  • Added gmod_chado_fts_prep.pl and gmod_create_summary_statistics.pl to the MANIFEST.
  • Improved how the interval stats table data get generated.
  • Added support for the primary_seq method to the Segment object.
  • Added support for using srcfeatureslice in command line instances.
  • Improved GFF and other dump formats from GBrowse (though they are still probably less than perfect).

Documentation

gmod_chado_fts_prep.pl
prepares a Chado schema to use full text searching

Modules

Bio::DB::Das::Chado
DAS-style access to a chado database
Bio::DB::Das::Chado::Segment
DAS-style access to a chado database
Bio::DB::Das::Chado::Segment::Feature

Provides

Bio::DB::Das::ChadoIterator
in lib/Bio/DB/Das/Chado.pm

Other files