NAME

SemanticWeb::Schema::BioChemEntity - Any biological

VERSION

version v22.0.0

DESCRIPTION

Any biological, chemical, or biochemical thing. For example: a protein; a gene; a chemical; a synthetic chemical.

ATTRIBUTES

associated_disease

associatedDisease

Disease associated to this BioChemEntity. Such disease can be a MedicalCondition or a URL. If you want to add an evidence supporting the association, please use PropertyValue.

A associated_disease should be one of the following types:

InstanceOf['SemanticWeb::Schema::MedicalCondition']
InstanceOf['SemanticWeb::Schema::PropertyValue']
Str

_has_associated_disease

A predicate for the "associated_disease" attribute.

bio_chem_interaction

bioChemInteraction

A BioChemEntity that is known to interact with this item.

A bio_chem_interaction should be one of the following types:

InstanceOf['SemanticWeb::Schema::BioChemEntity']

_has_bio_chem_interaction

A predicate for the "bio_chem_interaction" attribute.

bio_chem_similarity

bioChemSimilarity

A similar BioChemEntity, e.g., obtained by fingerprint similarity algorithms.

A bio_chem_similarity should be one of the following types:

InstanceOf['SemanticWeb::Schema::BioChemEntity']

_has_bio_chem_similarity

A predicate for the "bio_chem_similarity" attribute.

biological_role

biologicalRole

A role played by the BioChemEntity within a biological context.

A biological_role should be one of the following types:

InstanceOf['SemanticWeb::Schema::DefinedTerm']

_has_biological_role

A predicate for the "biological_role" attribute.

funding

A SemanticWeb::Schema::Grant that directly or indirectly provide funding or sponsorship for this item. See also [[ownershipFundingInfo]].

A funding should be one of the following types:

InstanceOf['SemanticWeb::Schema::Grant']

_has_funding

A predicate for the "funding" attribute.

has_bio_chem_entity_part

hasBioChemEntityPart

Indicates a BioChemEntity that (in some sense) has this BioChemEntity as a part.

A has_bio_chem_entity_part should be one of the following types:

InstanceOf['SemanticWeb::Schema::BioChemEntity']

_has_has_bio_chem_entity_part

A predicate for the "has_bio_chem_entity_part" attribute.

has_molecular_function

hasMolecularFunction

Molecular function performed by this BioChemEntity; please use PropertyValue if you want to include any evidence.

A has_molecular_function should be one of the following types:

InstanceOf['SemanticWeb::Schema::DefinedTerm']
InstanceOf['SemanticWeb::Schema::PropertyValue']
Str

_has_has_molecular_function

A predicate for the "has_molecular_function" attribute.

has_representation

hasRepresentation

A common representation such as a protein sequence or chemical structure for this entity. For images use schema.org/image.

A has_representation should be one of the following types:

InstanceOf['SemanticWeb::Schema::PropertyValue']
Str

_has_has_representation

A predicate for the "has_representation" attribute.

is_encoded_by_bio_chem_entity

isEncodedByBioChemEntity

Another BioChemEntity encoding by this one.

A is_encoded_by_bio_chem_entity should be one of the following types:

InstanceOf['SemanticWeb::Schema::Gene']

_has_is_encoded_by_bio_chem_entity

A predicate for the "is_encoded_by_bio_chem_entity" attribute.

is_involved_in_biological_process

isInvolvedInBiologicalProcess

Biological process this BioChemEntity is involved in; please use PropertyValue if you want to include any evidence.

A is_involved_in_biological_process should be one of the following types:

InstanceOf['SemanticWeb::Schema::DefinedTerm']
InstanceOf['SemanticWeb::Schema::PropertyValue']
Str

_has_is_involved_in_biological_process

A predicate for the "is_involved_in_biological_process" attribute.

is_located_in_subcellular_location

isLocatedInSubcellularLocation

Subcellular location where this BioChemEntity is located; please use PropertyValue if you want to include any evidence.

A is_located_in_subcellular_location should be one of the following types:

InstanceOf['SemanticWeb::Schema::DefinedTerm']
InstanceOf['SemanticWeb::Schema::PropertyValue']
Str

_has_is_located_in_subcellular_location

A predicate for the "is_located_in_subcellular_location" attribute.

is_part_of_bio_chem_entity

isPartOfBioChemEntity

Indicates a BioChemEntity that is (in some sense) a part of this BioChemEntity.

A is_part_of_bio_chem_entity should be one of the following types:

InstanceOf['SemanticWeb::Schema::BioChemEntity']

_has_is_part_of_bio_chem_entity

A predicate for the "is_part_of_bio_chem_entity" attribute.

taxonomic_range

taxonomicRange

The taxonomic grouping of the organism that expresses, encodes, or in some way related to the BioChemEntity.

A taxonomic_range should be one of the following types:

InstanceOf['SemanticWeb::Schema::DefinedTerm']
InstanceOf['SemanticWeb::Schema::Taxon']
Str

_has_taxonomic_range

A predicate for the "taxonomic_range" attribute.

SEE ALSO

SemanticWeb::Schema::Thing

SOURCE

The development version is on github at https://github.com/robrwo/SemanticWeb-Schema and may be cloned from git://github.com/robrwo/SemanticWeb-Schema.git

BUGS

Please report any bugs or feature requests on the bugtracker website https://github.com/robrwo/SemanticWeb-Schema/issues

When submitting a bug or request, please include a test-file or a patch to an existing test-file that illustrates the bug or desired feature.

AUTHOR

Robert Rothenberg <rrwo@cpan.org>

COPYRIGHT AND LICENSE

This software is Copyright (c) 2018-2023 by Robert Rothenberg.

This is free software, licensed under:

The Artistic License 2.0 (GPL Compatible)