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Bioinfo-0.1.12
River stage zero No dependents

Changes for version 0.1.12

  • Change: 31f4d47b035967b809332fea8534407db8c8b185 Author: Yan Xueqing <yanxueqing621@163.com> Date : 2017-12-17 23:20:15 +0000
    • Added max_target_seq parameters
  • Plus 14 releases after 2017-10-18 00:00:00 +0000.

Documentation

biotools
a bioinformatics toolkit that I used often

Modules

Bioinfo
my perl module and CLIs for Biology
Bioinfo::App
my perl module and CLIs for Biology
Bioinfo::App::Cmd::Blast
various operator related to Blast+
Bioinfo::App::Cmd::Blast::Cmd::ParseXML
parse XML file of blast+(with outfmt=5) into tabular format
Bioinfo::App::Cmd::Blast::Cmd::SplitSubmit
submit blast after splitting a fasta file into multiple files;
Bioinfo::App::Cmd::Blast::Cmd::SplitSubmitB
submit blast after splitting a fasta file into multiple files;
Bioinfo::App::Cmd::Fasta
my perl module and CLIs for Biology
Bioinfo::App::Cmd::Fasta::Cmd::GetByID
my perl module and CLIs for Biology
Bioinfo::App::Cmd::Fasta::Cmd::Split
my perl module and CLIs for Biology
Bioinfo::App::Cmd::Fasta::Cmd::SplitBlast
my perl module and CLIs for Biology
Bioinfo::Fasta
get one or more sequences from a FASTA file quickly.
Bioinfo::PBS
my perl module and CLIs for Biology
Bioinfo::PBS::Queue
used to submit a batch of task to Torque cluster

Other files