NAME
omop_csv_validator - Validate OMOP CDM CSV files against DDL-derived schemas
SYNOPSIS
omop_csv_validator --ddl DDL.sql --input DATA.csv [--sep "\t"]
OPTIONS
- --ddl
-
Path to the PostgreSQL DDL file defining OMOP CDM table structures.
- --input
-
Path to the input CSV file to validate.
- --sep
-
CSV field separator (default is comma). Example for tab:
--sep $'\t'
- --help, -h
-
Display this help message.
- --version, -V
-
Show the script's version (which corresponds to
OMOP::CSV::Validator::VERSION
).
EXAMPLE
bin/omop_csv_validator --ddl ddl/postgres.sql --input data/person.csv --sep "\t"