NAME

CLIPSeqTools::PreprocessApp - Tools to process a fastq file with CLIP-Seq data into a database compatible with clipseqtools.

SYNOPSIS

Tools to process a fastq file with CLIP-Seq data into a database compatible with clipseqtools.

DESCRIPTION

CLIPSeqTools::PreprocessApp is primarily a collection of scripts and modules that can be used to process a fastq file with CLIP-Seq data into a database compatible with clipseqtools. Contains tools to do the alignment, adaptor trimming, and other common tasks on a fastq file.

EXAMPLES