Changes for version 0.1.0 - 2007-03-09
- POD improvements
- more tests
- small bgrep improvements
- upstream and downstream in GUUGle broken
- maxhits in GUUGle broken
- test searches for EMBOSS
Documentation
Wrapper for several suffix array tools
Modules
Perl extension for searching in Fasta files
Agrep back-end
Superclass for all back-ends
GUUGle back-end
HyPa back-end
Vmatch back-end
Data structure for a back-end search hit
Data structure for all search settings
Superclass for all filter modules
Example Filter
Superclass for all Bio::Grep* packages