NAME

Bio::Gonzales::Align::IO::Stockholm - IO class for the stockholm format

SYNOPSIS

use Bio::Gonzales::Align::IO::Stockholm;


my $sto = Bio::Gonzales::Align::IO::Stockholm->new(
    file       => 'xyz.aln.fa',
    mode       => '>',
    wrap       => 80,
    relaxed    => undef,
    file_feats => {}
);

$sto->write_aln($seqs);

$sto->close;

DESCRIPTION

OPTIONS

SUBROUTINES =head1 METHODS

SEE ALSO

AUTHOR

jw bargsten, <joachim.bargsten at wur.nl>