NAME

CracTools::Utils - A set of useful functions

VERSION

version 1.08

reverseComplement

Arg [1] : String - a DNA sequence
Example : $reverse = reverseComplement('ATGC');
Description : Reverse complemente the sequence in argument.
              For example : reverse_comptement('ATGC') returns : 'GCAT'.
ReturnType  : String
Exceptions  : none

reverse_tab

Arg [1] : String - a string with values separated with coma.
Example : $reverse = reverse_tab('2,1,1,1,0,0,1');
Description : Reverse the values of the string in argument.
              For example : reverse_tab('1,2,0,1') returns : '1,0,2,1'.
ReturnType  : String
Exceptions  : none

convertStrand

Arg [1] : Character - strand

Description : Retrun the strand converted + => 1 or 1 => +

AUTHORS

• Nicolas PHILIPPE <nicolas.philippe@inserm.fr>

• Jérôme AUDOUX <jaudoux@cpan.org>

COPYRIGHT AND LICENSE

This software is Copyright (c) 2014 by IRB/INSERM (Institut de Recherche en Biothérapie / Institut National de la Santé et de la Recherche Médicale).

This is free software, licensed under:

CeCILL FREE SOFTWARE LICENSE AGREEMENT, Version 2.1 dated 2013-06-21