NAME

fastQ_brew_Utilities - utilities for fastQ_brew

SYNOPSIS

use Moose;
use Modern::Perl;
use base 'Exporter';
use Statistics::Basic qw(:all);
use List::Util qw(min);
use autodie;

DESCRIPTION

This package provides Utility support to fastQ_brew

Support

All contributions are welcome

Reporting Bugs

Report bugs to the fastQ_brew bug tracking system to help keep track of the bugs and their resolution. Bug reports can be submitted via the web: https://github.com/dohalloran/fastQ_brew/issues

APPENDIX

The rest of the documentation details each of the object methods.

prob_calc

Title   :  prob_calc
Usage   :  $prob = prob_calc( $read, $lib, $cuttoff );
Function:  determines whether phred min (worst quality) is within 1 sd of mean
Returns :  1 or 0