NAME

bioportal_csv2obo.pl - Generates an OBO-formatted ontology from a given CSV file from BioPortal.

DESCRIPTION

Generates an OBO-formatted ontology from a given CSV file from BioPortal. The OBO file provides a simple representation based on the information captured in the CSV file which might be sufficient for certain applications.

This script will be updated according to the evolution of the CSV file from BioPortal.

AUTHOR

Erick Antezana, <erick.antezana -@- gmail.com>

COPYRIGHT AND LICENSE

This script is free software; you can redistribute it and/or modify it under the same terms as Perl itself, either Perl version 5.8.7 or, at your option, any later version of Perl 5 you may have available.

To install OBO::Util::Set, copy and paste the appropriate command in to your terminal.

cpanm

cpanm OBO::Util::Set

CPAN shell

perl -MCPAN -e shell
install OBO::Util::Set

For more information on module installation, please visit the detailed CPAN module installation guide.

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COPYRIGHT AND LICENSE

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