NAME

Bio::Phenotype::OMIM::MiniMIMentry - Representation of a Mini MIM entry

SYNOPSIS

use Bio::Phenotype::OMIM::MiniMIMentry;

$mm = Bio::Phenotype::OMIM::MiniMIMentry->new( -description  => "The central form of ...",
                                               -created      => "Victor A. McKusick: 6/4/1986",
                                               -contributors => "Kelly A. Przylepa - revised: 03/18/2002",
                                               -edited       => "alopez: 06/03/1997" );

DESCRIPTION

This class representats of Mini MIM entries. This class is intended to be used together with a OMIM entry class.

FEEDBACK

Mailing Lists

User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to one of the Bioperl mailing lists. Your participation is much appreciated.

bioperl-l@bioperl.org                  - General discussion
http://bioperl.org/wiki/Mailing_lists  - About the mailing lists

Support

Please direct usage questions or support issues to the mailing list:

bioperl-l@bioperl.org

rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address it. Please include a thorough description of the problem with code and data examples if at all possible.

Reporting Bugs

Report bugs to the Bioperl bug tracking system to help us keep track the bugs and their resolution. Bug reports can be submitted via the web:

https://github.com/bioperl/bioperl-live/issues

AUTHOR

Christian M. Zmasek

Email: czmasek-at-burnham.org or cmzmasek@yahoo.com

WWW: http://monochrome-effect.net/

Address:

Genomics Institute of the Novartis Research Foundation
10675 John Jay Hopkins Drive
San Diego, CA 92121

APPENDIX

The rest of the documentation details each of the object methods.

new

Title   : new
Usage   : $mm = Bio::Phenotype::OMIM::MiniMIMentry->new( -description  => "The central form of ...",
                                                         -created      => "Victor A. McKusick: 6/4/1986",
                                                         -contributors => "Kelly A. Przylepa - revised: 03/18/2002",
                                                         -edited       => "alopez: 06/03/1997" );

Function: Creates a new MiniMIMentry object.
Returns : A new MiniMIMentry object.
Args    : -description  => a description
          -created      => name(s) and date(s) (free form)
          -contributors => name(s) and date(s) (free form)
          -edited       => name(s) and date(s) (free form)

init

Title   : init()
Usage   : $mm->init();   
Function: Initializes this MiniMIMentry to all "".
Returns : 
Args    :

description

Title   : description
Usage   : $mm->description( "The central form of ..." );
          or
          print $mm->description();
Function: Set/get for the description field of the Mini MIM database.
Returns : The description.
Args    : The description (optional).

created

Title   : created
Usage   : $mm->created( "Victor A. McKusick: 6/4/1986" );
          or
          print $mm->created();
Function: Set/get for the created field of the Mini MIM database.
Returns : Name(s) and date(s) [scalar - free form].
Args    : Name(s) and date(s) [scalar - free form] (optional).

contributors

Title   : contributors
Usage   : $mm->contributors( "Kelly A. Przylepa - revised: 03/18/2002" );
          or
          print $mm->contributors();
Function: Set/get for the contributors field of the Mini MIM database.
Returns : Name(s) and date(s) [scalar - free form].
Args    : Name(s) and date(s) [scalar - free form] (optional).

edited

Title   : edited
Usage   : $mm->edited( "alopez: 06/03/1997" );
          or
          print $mm->edited();
Function: Set/get for the edited field of the Mini MIM database.
Returns : Name(s) and date(s) [scalar - free form].
Args    : Name(s) and date(s) [scalar - free form] (optional).

to_string

Title   : to_string()
Usage   : print $mm->to_string();
Function: To string method for MiniMIMentry objects.
Returns : A string representations of this MiniMIMentry.
Args    :

cpanm Bio::Seq

perl -MCPAN -e shell
install Bio::Seq