NAME

Bio::DB::SeqVersion - front end to querying databases for identifier versions

SYNOPSIS

use Bio::DB::SeqVersion;

my $query = Bio::DB::SeqVersion->new(-type => 'gi');

my @all_gis = $query->get_all(2);

my $live_gi = $query->get_recent(2);

DESCRIPTION

The default type is 'gi'.

FEEDBACK

Mailing Lists

User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the Bioperl mailing list. Your participation is much appreciated.

bioperl-l@bioperl.org                  - General discussion
http://bioperl.org/wiki/Mailing_lists  - About the mailing lists

Support

Please direct usage questions or support issues to the mailing list:

bioperl-l@bioperl.org

rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address it. Please include a thorough description of the problem with code and data examples if at all possible.

Reporting Bugs

Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the web:

https://github.com/bioperl/bioperl-live/issues

AUTHOR - Brian Osborne

Email bosborne at alum.mit.edu

CONTRIBUTORS

Torsten Seemann - torsten.seemann AT infotech.monash.edu.au

APPENDIX

The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _

new()

Usage   : my $obj = Bio::DB::SeqVersion->new();
Function: Create a Bio::DB::SeqVersion object 
Returns : An instance of Bio::DB::SeqVersion
Args    : -type      Identifier namespace, default is 'gi' 

get_recent()

Usage   :
Function:
Example :
Returns : 
Args    :

get_all()

Usage   :
Function:
Example :
Returns : 
Args    :

_load_seqversion_module

Title   : _load_seqversion_module
Usage   : Used internally
Function: Loads up a module at run time on demand
Example :
Returns :
Args    : Name of identifier type

default_id_type

Title   : default_id_type
Usage   : my $type = $self->default_id_type
Function: Returns default identifier type for this module
Returns : string
Args    : none

cpanm Bio::Seq

perl -MCPAN -e shell
install Bio::Seq