NAME
Bio::Biblio::IO::medline2ref - a converter of a raw hash to MEDLINE citations
VERSION
version 1.70
SYNOPSIS
# to be writtenDESCRIPTION
# to be writtenMETHODS
new
convert
INTERNAL METHODS
_load_instance
_new_instance
Load a module (given as a real module name, e.g. 'Bio::Biblio::MedlineJournalArticle'), call new() method on it, and return the instance returned by the new() method
_convert_date
See OpenBQS specification (http://www.ebi.ac.uk/~senger/openbqs/) how a date should be coded; TBD: this can be improved - checking is missing, timezones, converting to UTC... Also note that this routine does not convert 'medline_date' - it is stored in a separate attribute without ant conversion.
_convert_personal_name
$person is a hash with persons attributes - we need to create and return a Bio::Biblio::Person object
_convert_journal_article
Takes journal article related attributes from $article and convert them into $result and at the end call _convert_article (which is shared with book article)
_convert_book_article
Takes book article related attributes from $article and convert them into $result and at the end call _convert_article (which is shared with journal article)
_convert_article
Takes from $source article related attributes and convert them into $article (these attributes are the same both for journal and book articles
_convert_providers
Takes a ref-array of providers - they can be persons or organisations, and returns an array of converted providers
FEEDBACK
Mailing lists
User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the Bioperl mailing list. Your participation is much appreciated.
bioperl-l@bioperl.org - General discussion
http://bioperl.org/wiki/Mailing_lists - About the mailing listsSupport
Please direct usage questions or support issues to the mailing list: bioperl-l@bioperl.org
rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address it. Please include a thorough description of the problem with code and data examples if at all possible.
Reporting bugs
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the web:
https://redmine.open-bio.org/projects/bioperl/LEGAL
Authors
Martin Senger <senger@ebi.ac.uk>
Copyright and License
This software is Copyright (c) by 2002 European Bioinformatics Institute and released under the license of the same terms as the perl 5 programming language system itself