NAME

cractools extract - Extract events identified by CRAC.

VERSION

version 1.251

extractSplicesFromSAMline

printSplices

extractMutationsFromSAMline

printMutations

addMutation

countReadCoverFromRegion

getSeqOrNs

extractChimerasFromSAMline

printChimeras

AUTHORS

Nicolas PHILIPPE <nphilippe.research@gmail.com>
Jérôme AUDOUX <jaudoux@cpan.org>
Sacha BEAUMEUNIER <sacha.beaumeunier@gmail.com>

COPYRIGHT AND LICENSE

This software is Copyright (c) 2017 by IRMB/INSERM (Institute for Regenerative Medecine and Biotherapy / Institut National de la Santé et de la Recherche Médicale) and AxLR/SATT (Lanquedoc Roussilon / Societe d'Acceleration de Transfert de Technologie).

This is free software, licensed under:

The GNU Affero General Public License, Version 3, November 2007

To install CracTools, copy and paste the appropriate command in to your terminal.

cpanm

cpanm CracTools

CPAN shell

perl -MCPAN -e shell
install CracTools

For more information on module installation, please visit the detailed CPAN module installation guide.

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