NAME
Bio::Polloc::Locus::composition - A composition feature
DESCRIPTION
This feature is intended to save the content of a group of residues in a certain sequence. This feature was first created to reflect the G+C content.
AUTHOR - Luis M. Rodriguez-R
Email lmrodriguezr at gmail dot com
APPENDIX
Methods provided by the package
new
Initialization method.
Arguments
- -letters str
-
The residues
- -composition float
-
The percentage of the sequence covered by the residues (letters).
letters
Gets/sets the analysed residues.
Arguments
The residues (str, optional).
Returns
The residues (str or undef).
composition
Gets/sets the percentage of the sequence covered by the residues (letters).
Arguments
The percentage (float, optional).
Returns
The percentage (float or undef).
score
Dummy function, required by the Bio::Polloc::LocusI interface. Returns undef because any score is associated
INTERNAL METHODS
Methods intended to be used only within the scope of Bio::Polloc::*