NAME
Bio::Chado::Schema::Result::NaturalDiversity::NdExperiment
ACCESSORS
nd_experiment_id
data_type: 'integer'
is_auto_increment: 1
is_nullable: 0
sequence: 'nd_experiment_nd_experiment_id_seq'
nd_geolocation_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 0
type_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 0
RELATIONS
nd_geolocation
Type: belongs_to
Related object: Bio::Chado::Schema::Result::NaturalDiversity::NdGeolocation
type
Type: belongs_to
Related object: Bio::Chado::Schema::Result::Cv::Cvterm
nd_experiment_contacts
Type: has_many
Related object: Bio::Chado::Schema::Result::NaturalDiversity::NdExperimentContact
nd_experiment_dbxrefs
Type: has_many
Related object: Bio::Chado::Schema::Result::NaturalDiversity::NdExperimentDbxref
nd_experiment_genotypes
Type: has_many
Related object: Bio::Chado::Schema::Result::NaturalDiversity::NdExperimentGenotype
nd_experiment_phenotypes
Type: has_many
Related object: Bio::Chado::Schema::Result::NaturalDiversity::NdExperimentPhenotype
nd_experiment_projects
Type: has_many
Related object: Bio::Chado::Schema::Result::NaturalDiversity::NdExperimentProject
nd_experimentprops
Type: has_many
Related object: Bio::Chado::Schema::Result::NaturalDiversity::NdExperimentprop
nd_experiment_protocols
Type: has_many
Related object: Bio::Chado::Schema::Result::NaturalDiversity::NdExperimentProtocol
nd_experiment_pubs
Type: has_many
Related object: Bio::Chado::Schema::Result::NaturalDiversity::NdExperimentPub
nd_experiment_stocks
Type: has_many
Related object: Bio::Chado::Schema::Result::NaturalDiversity::NdExperimentStock
create_nd_experimentprops
Usage: $set->create_nd_experimentprops({ baz => 2, foo => 'bar' });
Desc : convenience method to create experiment properties using cvterms
from the ontology with the given name
Args : hashref of { propname => value, ...},
options hashref as:
{
autocreate => 0,
(optional) boolean, if passed, automatically create cv,
cvterm, and dbxref rows if one cannot be found for the
given experimentprop name. Default false.
cv_name => cv.name to use for the given experimentprops.
Defaults to 'nd_experiment_property',
db_name => db.name to use for autocreated dbxrefs,
default 'null',
dbxref_accession_prefix => optional, default
'autocreated:',
definitions => optional hashref of:
{ cvterm_name => definition,
}
to load into the cvterm table when autocreating cvterms
rank => force numeric rank. Be careful not to pass ranks that already exist
for the property type. The function will die in such case.
allow_duplicate_values => default false.
If true, allow duplicate instances of the same experiment
and types in the properties of the experiment. Duplicate
types will have different ranks.
}
Ret : hashref of { propname => new experimentprop object }