AUTHOR
Luis M. Rodriguez-R < lmrodriguezr at gmail dot com >
DESCRIPTION
Simulates an experiment defined in a .bme file ([Typing] section) using a list of loci as reference, and generates a graphical representation.
LICENSE
This script is distributed under the terms of The Artistic License. See LICENSE.txt for details.
SYNOPSIS
perl polloc_detect.pl arguments
The arguments must be in the following order:
- Configuration
-
The configuration file (a .bme or .cfg file).
- Input GFF
-
A path to the GFF file containing the reference loci.
- Output PNG
-
A path to the PNG image to be generated.
- Inseqs
-
All the following arguments will be treated as input files. Each file is assumed to contain a genome (that can contain one or more sequence) in [multi-]fasta format.
Run perl polloc_vntrs.pl without arguments to see the help message.