NAME

download_mlst_databases - Downloads all the MLST databases to disk. It requires access to the Internet.

VERSION

version 2.1.1706216

SYNOPSIS

Downloads all the MLST databases to disk. It requires access to the Internet.

# download everything with defaults
download_mlst_databases

# print version
download_mlst_databases -v

# XML file containing details of the MLST databases (from pubmlst)
download_mlst_databases -c my_config_file.json

# destination base directory defaults to the environment variable \$MLST_DATABASES
download_mlst_databases -b /path/to/destination

AUTHOR

Andrew J. Page <ap13@sanger.ac.uk>

COPYRIGHT AND LICENSE

This software is Copyright (c) 2012 by Wellcome Trust Sanger Institute.

This is free software, licensed under:

The GNU General Public License, Version 3, June 2007