NAME
UMLS::SenseRelate CHANGES
Changes from version 0.27 to 0.29
1. added three additional aggregators (andness, disp and closeness)
Changes from version 0.25 to 0.27
1. added two additional aggregators (orness and max)
Changes from version 0.23 to 0.25
1. added the --info option to the umls-senserelate-evaluation.pl program
to print out the accuracy of the individual target words.
2. add the umls-senserelate-ttest.pl program which takes two info files
generated by the umls-senserelate-evaluation.pl program and calculates
their signficance using the Statistics::TTest cpan module.
Changes from version 0.21 to 0.23
1. added an --intrinsic [santos|sanchez] option to use the information
content measures with the intrinisic information content metrics
proposed by Santos, et al 2004 and Sanchez, et al 2011. This is
currently only available in the umls-targetword-senserelate.pl program
but I will be adding it to the allwords once I get it sped up a bit.
Changes from version 0.19 to 0.21
1. modified the --weight option so that stopwords are included in the
distance
Changes from version 0.17 to 0.19
1. added --weight option to weight the cuis/terms/words based on the
distance they are from the target word; this is in allwords as well as
target word
Changes from version 0.15 to 0.17
1. added a --cuis option to use the surrounding CUIs obtained by MetaMap
when using the --mmxml formatted input file
2. speed things up - working more on this
3. added a --loadcache and --getcache option to target word programs
Changes from version 0.13 to 0.15
1. added a --restrict option which uses only the terms that have a
mapping to a UMLS concept in the window - similar to --stoplist only
using the mapping to determine if the term is a content term or not
2. modified the --precision option to be used with the similarity
measures
Changes from version 0.11 to 0.13
1. add the option to use the default parameter files for the vector and
the information content files
2. added a aw-xml check to the all words disambiguation utils/ program.
3. added the --mmxml option to the target words disambiguation utils/
program
4. added the --candidate option to the target words disambiguation
utils/ program
5. added format checks to teh target words disambiguation utils/ program
Changes from version 0.09 to 0.11
1. added time stamp to the default log directory in
umls-targetword-senserelate.pl - forgot that one
2. updated the stderr ouput parameters in the utils programs
3. added XML::Twig dependency
4. added SYNOPSIS to AllWords.pm module
5. changed internal modules to account for changes in the output
containers in the UMLS::Interface and UMLS::Similarity packages
6. changed the assignSenses function in the AllWords.pm module to return
a reference to an array rather than the array itself.
7. moved functions.t to targetword.t and added an allwords.t test case.
Changes from version 0.07 to 0.09
1. added a timestamp to the default log directory in the converter
programs and the umls-allwords-senserelate.pl program
2. added the --target option in the plain2mm-xml.pl converter program
3. added a README in the converter directory describing in more detail
the converter programs (with examples)
4. added more sample formats in the samples/ directory
5. added a --candidate option to umls-allwords-senserelate. Note that
this was originally called --senses but I thought this would be clearer
6. modified the id to include the document, sentence and term id used in
the output of the umls-allwords-senserelate.pl program
7. changes umls-senserelate.pl to umls-targetword-senserelate.pl
Changes from version 0.05 to 0.07
1. modified the version information in the .pm modules
Changes from version 0.03 to 0.05
1. added an AllWords.pm module with a corresponding
umls-allwords-senserelate.pl program.
2. added converter programs in the coverters/ directory
Changes from version 0.01 to 0.03
1. modified how the CUIs were obtained when using the vector or lesk
relatedness measures
version 0.01
1. initial release