NAME

UR - rich declarative non-hierarchical transactional objects

VERSION

This document describes UR version 0.7.

SYNOPSIS

First create a Namespace class for your application, CdExample.pm

package CdExample;
use UR;

class CdExample {
    is => 'UR::Namespace'
};

1;

Next, define a data source representing your database, CdExample/DataSource/DB1.pm

package CdExample::DataSource::DB1;
use CdExample;

class CdExample::DataSource::DB1 {
    is => ['UR::DataSource::Mysql'],
    has_constant => [
        server  => { value => 'mysql.example.com' },
        login   => { value => 'mysqluser' },
        auth    => { value => 'mysqlpasswd' },
    ]
};

1;

or to get something going quickly, SQLite has smart defaults...

class CdExample::DataSource::DB1 {
    is => 'UR::DataSource::SQLite',
};

Create a class to represent artists, who have many CDs, in CdExample/Artist.pm

package CdExample::Artist;
use CdExample;

class CdExample::Artist {
    id_by => 'artist_id',
    has => [ 
        name => { is => 'Text' },
        cds  => { is => 'CdExample::Cd', is_many => 1, reverse_as => 'artist' }
    ],
    data_source => 'CdExample::DataSource::DB1',
    table_name => 'ARTISTS',
};
1;

Create a class to represent CDs, in CdExample/Cd.pm

package CdExample::Cd;
use CdExample;
        
class CdExample::Cd {
    id_by => 'cd_id',
    has => [
        artist => { is => 'CdExample::Artist', id_by => 'artist_id' },
        title  => { is => 'Text' },
        year   => { is => 'Integer' },
        artist_name => { via => 'artist', to => 'name' },
    ],
    data_source => 'CdExample::DataSource::DB1',
    table_name => 'CDS',
};
1;

If the database existed already, you could have done this to get it to write the last 2 classes:

cd CdExample;
ur update classes

If the database does not exist, you can run this to generate the tables and columns from the classes you've written (very experimental):

cd CdExample
ur update schema

You can then use these classes in your application code:

  # Using the namespace enables auto-loading of modules upon first attempt to call a method
  use CdExample;  
  
  # This would get back all Artist objects:
  my @all_artists = CdExample::Artist->get();

  # After the above, further requests would be cached
  # if that set were large though, you might want to iterate gradually:
  my $artist_iter = CdExample::Artist->create_iterator();

  # Get the first object off of the iterator
  my $first_artist = $artist_iter->next();

  # Get all the CDs published in 2007 for the first artist
  my @cds_2007 = CdExample::Cd->get(year => 2007, artist => $first_artist);
 
  # Use non-equality operators:
  my @same_some_artists = CdExample::Artist->get(
      'name like' => 'John%',
      'year between' => ['2004','2009']
  );

  # This will use a JOIN with the ARTISTS table internally to filter
  # the data in the database.  @some_cds will contain CdExample::Cd objects.
  # As a side effect, related Artist objects will be loaded into the cache
  my @some_cds = CdExample::Cd->get(
      year => '2001', 
      'artist_name like' => 'Bob%' 
  );

  # These values would be cached...
  my @artists_for_some_cds = map { $_->artist } @some_cds;
  
  # This will use a join to prefetch Artist objects related to the
  # objects that match the filter
  my @other_cds = CdExample::Cd->get(
      'title like' => '%White%',
      -hints => ['artist']
  );
  my $other_artist_0 = $other_cds[0]->artist;  # already loaded so no query
  
  # create() instantiates a new object in the current "context", but does not save 
  # it in the database.  It will autogenerate its own cd_id:
  my $new_cd = CdExample::Cd->create(
      title => 'Cool Album',
      year  => 2009
  );

  # Assign it to an artist; fills in the artist_id field of $new_cd
  $first_artist->add_cd($new_cd);
  
  # Save all changes back to the database
  UR::Context->current->commit;

DESCRIPTION

UR is a class framework and object/relational mapper for Perl. It starts with the familiar Perl meme of the blessed hash reference as the basis for object instances, and extends its capabilities with ORM (object-relational mapping) capabilities, object cache, in-memory transactions, more formal class definitions, metadata, documentation system, iterators, command line tools, etc.

UR can handle multiple column primary and foreign keys, SQL joins involving class inheritance and relationships, and does its best to avoid querying the database unless the requested data has not been loaded before. It has support for SQLite, Oracle, Mysql and Postgres databases, and the ability to use a text file as a table.

UR uses the same syntax to define non-persistent objects, and supports in-memory transactions for both.

DOCUMENTATION

Manuals

UR::Manual::Overview - UR from Ten Thousand Feet

UR::Manual::Tutorial - Getting started with UR

UR::Manual::Presentation - Slides for a presentation on UR

UR::Manual::Cookbook - Recepies for getting stuff working

UR::Manual::Metadata - UR's metadata system

UR::Object::Type::Initializer - Defining classes

UR::Manual::UR - UR's command line tool

Basic Entities

UR::Object - Pretty much everything is-a UR::Object

UR::Object::Type - Metadata class for Classes

UR::Object::Property - Metadata class for Properties

UR::Namespace - Manage packages and classes

UR::Context - Software transactions and More!

UR::DataSource - How and where to get data

Environment Variables

UR uses several environment variables to do things like run with database commits disabled, dump SQL, control cache size, etc.

See UR::Env.

DEPENDENCIES

Class::Autouse Cwd Data::Dumper Date::Calc Date::Parse DBI File::Basename FindBin FreezeThaw Path::Class Scalar::Util Sub::Installer Sub::Name Sys::Hostname Text::Diff Time::HiRes XML::Simple

AUTHORS

UR was built by the software development team at the Washington University Genome Center. Incarnations of it run laboratory automation and analysis systems for high-throughput genomics.

Scott Smith	    sakoht@cpan.org	Orginal Architecture
Anthony Brummett   brummett@cpan.org	Primary Development

Craig Pohl
Todd Hepler
Ben Oberkfell
Kevin Crouse
Adam Dukes
Indraniel Das
Shin Leong
Eddie Belter
Ken Swanson
Scott Abbott
Alice Diec
William Schroeder
Eric Clark
Shawn Leonard
Lynn Carmichael
Jason Walker
Amy Hawkins
Gabe Sanderson
James Weible
James Eldred
Michael Kiwala
Mark Johnson
Kyung Kim
Jon Schindler
Justin Lolofie
Chris Harris
Jerome Peirick
Ryan Richt
John Osborne
David Dooling

LICENCE AND COPYRIGHT

Copyright (C) 2002-2009 Washington University in St. Louis, MO.

This sofware is licensed under the same terms as Perl itself. See the LICENSE file in this distribution.