NAME

bp_nrdb.PLS - a script to emulate Warren Gish's nrdb, make a unique sequence database from a set of input databases

SYNOPSIS

Usage: bp_nrdb.PLS [options] file1 file2 file3

Alternative usage bp_nrdb.PLS -p [options] file1 id1 file2 id2 file3 id3

DESCRIPTION

This script will create a unique database of sequences (quasi-nonredundant). The options are:

-o filename          - the filename the db is written (STDOUT by default)
-a filename          - the filename to append the db to
-l#                  - minimum required sequence length
-i                   - do not check for duplicates
-n#                  - max number of descriptions to report per seq
-d#                  - delimiter to use between consecutive descriptions
-p                   - use database id prefixes from command line

AUTHOR

Jason Stajich, jason-at-bioperl-dot-org