Revision history for Perl extension ShatterProof.
0.13 Mon Jun 22 17:00:00 2015
-Avoid division by zero when there are no matching breakpoints for the
insertions provided
0.13 Tue Jul 16 17:00:00 2013
-corrected logical error in calculate_loh_score that was allowing
negative sized regions of heterozygozity
0.12 Fri Jun 28 15:00:00 2013
-updates to testing package
-changed sorting order of interchromosomal translocation output file
0.11 Mon Jun 24 17:00:00 2013
-updates to testing package
-changed JSON to JSON::XS
-changed all sorts in Shatterproof.pm to stable sorts
-reduced the number of posix::ceil calculations
0.10 Wed Jun 19 20:00:00 2013
-updates to testing package
0.09 Mon Jun 10 14:00:00 2013
-updates to testing package
0.08 Wed May 22 13:00:00 2013
-added testing package
0.07 Sun Dec 27 14:00:00 2012
-added example guide for provided sample data
0.06 Sun Dec 27 13:00:00 2012
-added additional documentation for new translocation cut-off config
variable
0.05 Sun Dec 26 19:00:00 2012
-modification to scoring equations for translocation hallmark
-added maximum number of translocation chromosomes parameter
-added check for tailing backslash on directory paths
-removed POD method headers
-tp53 score can only be achieved by setting the command line option, tp53
mutations that are discovered will be reported but will have not affect
on scores
-added sample data directory with example run guide
0.04 Sun Nov 25 18:22:00 2012
-minor commenting changes
-stable build before changes to translocation scoring equation
0.003 Thur Nov 8 17:23:00 2012
- added missing dependency declaration on File::Basename, List::Util, POSIX
0.002 Thur Nov 8 14:54:00 2012
- added missing dependency declaration on Switch
0.001 Tue Sep 25 16:20:41 2012
- original version; created by h2xs 1.23 with options
-AXc -n ShatterProof